Repository revision
26:5b80f544c67f

Repository 'snpeff'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/snpeff

SnpEff databases: tool metadata
Miscellaneous
list available databases
snpEff_databases
toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_databases/4.3+T.galaxy2
4.3+T.galaxy2
snpEff -version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_databases/4.3+T.galaxy2 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_databases/4.0.0
snpEff_databases
Requirements (dependencies defined in the <requirements> tag set)
name version type
snpeff 4.3.1t package
Additional information about this tool
snpEff databases | grep -v '^---' | sed 's/^Genome/#Genome/' | sed 's/  *//g'

        #if $include_pattern:
             | grep -e '^#' -e '${include_pattern}'
        #end if

        #if $exclude_pattern:
             | grep -v '${exclude_pattern}'
        #end if

        > '${snpeff_dbs}'
    
None
False
Functional tests
name inputs outputs required files
Test-1 name: value
value
Test-2 include_pattern: ebola
name: value
value