| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/qiime_split_libraries_fastq/qiime_split_libraries_fastq/1.9.1.0 (this tool) |
| qiime_split_libraries_fastq |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| qiime | 1.9.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
min_per_read_length_fraction: 0.75 start_seq_id: 0 max_barcode_errors: 1.5 sequence_max_n: 0 store_demultiplexed_fastq: False retain_unassigned_reads: False store_qual_scores: False barcode|barcode_type: golay_12 phred_quality_threshold: 19 rev_comp: False rev_comp_barcode: False sequence_read_fps: split_libraries_fastq/lane1_read1.fastq.gz rev_comp_mapping_barcodes: True phred_offset: max_bad_run_length: 3 barcode_read_fps: split_libraries_fastq/lane1_barcode.fastq.gz mapping_fps: split_libraries_fastq/map.txt |
attributes: name attributes: name attributes: name |
split_libraries_fastq/lane1_read1.fastq.gz split_libraries_fastq/map.txt split_libraries_fastq/lane1_barcode.fastq.gz name |
| Test-2 |
min_per_read_length_fraction: 0.75 start_seq_id: 0 max_barcode_errors: 1.5 sequence_max_n: 0 store_demultiplexed_fastq: True retain_unassigned_reads: False store_qual_scores: True barcode|barcode_type: golay_12 phred_quality_threshold: 19 rev_comp: False rev_comp_barcode: False sequence_read_fps: split_libraries_fastq/lane1_read1.fastq.gz rev_comp_mapping_barcodes: True phred_offset: max_bad_run_length: 3 barcode_read_fps: split_libraries_fastq/lane1_barcode.fastq.gz mapping_fps: split_libraries_fastq/map.txt |
attributes: name attributes: name attributes: name attributes: name attributes: name |
split_libraries_fastq/lane1_read1.fastq.gz split_libraries_fastq/map.txt split_libraries_fastq/lane1_barcode.fastq.gz name |
| Test-3 |
min_per_read_length_fraction: 0.75 start_seq_id: 0 max_barcode_errors: 1.5 sequence_max_n: 0 store_demultiplexed_fastq: False retain_unassigned_reads: False store_qual_scores: False barcode|barcode_type: golay_12 phred_quality_threshold: 19 rev_comp: False rev_comp_barcode: False sequence_read_fps: ['split_libraries_fastq/lane1_read1.fastq.gz', 'split_libraries_fastq/lane2_read1.fastq.gz'] rev_comp_mapping_barcodes: True phred_offset: max_bad_run_length: 3 barcode_read_fps: ['split_libraries_fastq/lane1_barcode.fastq.gz', 'split_libraries_fastq/lane2_barcode.fastq.gz'] mapping_fps: ['split_libraries_fastq/map.txt', 'split_libraries_fastq/map.txt'] |
attributes: name attributes: name attributes: name |
split_libraries_fastq/lane1_read1.fastq.gz split_libraries_fastq/lane2_read1.fastq.gz split_libraries_fastq/map.txt split_libraries_fastq/lane1_barcode.fastq.gz split_libraries_fastq/lane2_barcode.fastq.gz name |
| Test-4 |
sample_ids: my.sample.1 start_seq_id: 0 min_per_read_length_fraction: 0.75 max_bad_run_length: 3 retain_unassigned_reads: False store_qual_scores: False barcode|barcode_type: not-barcoded phred_quality_threshold: 19 rev_comp_barcode: False sequence_read_fps: split_libraries_fastq/lane1_read1.fastq.gz rev_comp_mapping_barcodes: True phred_offset: store_demultiplexed_fastq: False rev_comp: False sequence_max_n: 0 |
attributes: name attributes: name attributes: name |
split_libraries_fastq/lane1_read1.fastq.gz name |
| Test-5 |
sample_ids: my.sample.1,my.sample.2 start_seq_id: 0 min_per_read_length_fraction: 0.75 max_bad_run_length: 3 retain_unassigned_reads: False store_qual_scores: False barcode|barcode_type: not-barcoded phred_quality_threshold: 19 rev_comp_barcode: False sequence_read_fps: ['split_libraries_fastq/lane1_read1.fastq.gz', 'split_libraries_fastq/lane2_read1.fastq.gz'] rev_comp_mapping_barcodes: True phred_offset: store_demultiplexed_fastq: False rev_comp: False sequence_max_n: 0 |
attributes: name attributes: name attributes: name |
split_libraries_fastq/lane1_read1.fastq.gz split_libraries_fastq/lane2_read1.fastq.gz name |