Repository revision
6:88eedb4abea0

Repository 'bam_to_sam'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam

BAM-to-SAM tool metadata
Miscellaneous
BAM-to-SAM
convert BAM to SAM
bam_to_sam
toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam/bam_to_sam/2.0.1
2.0.1
samtools 2>&1 | grep Version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam/bam_to_sam/2.0.2
toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam/bam_to_sam/2.0.1 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam/bam_to_sam/2.0
toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam/bam_to_sam/1.0.6
toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam/bam_to_sam/1.0.4
toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam/bam_to_sam/1.0.3
bam_to_sam
Requirements (dependencies defined in the <requirements> tag set)
name version type
samtools 1.9 package
Functional tests
name inputs outputs required files
Test-1 header: -h
input1: bam_to_sam_in1.bam
attributes: name
bam_to_sam_in1.bam
name
Test-2 header: -H
input1: bam_to_sam_in1.bam
attributes: name
bam_to_sam_in1.bam
name
Test-3 header:
input1: bam_to_sam_in1.bam
attributes: name
bam_to_sam_in1.bam
name