| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/ribowaltz_process/ribowaltz_process/1.2.0+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/ribowaltz_process/ribowaltz_process/@VERSION@ (this tool) |
| ribowaltz_process |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| ribowaltz | 1.2.0 | package |
| r-getopt | 1.20.3 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
rep_samples_0|sample_name: Replicate1 rep_samples_0|bam_file: rep1.bam gtf: rep1_annot.gtf.gz refseq_sep: . save_rdata: True psite_additional|flanking: 6 psite_additional|use_start: True psite_additional|psite_extrimity: auto psite_additional|cl: 99 coverage_additional|psites_per_region: True coverage_additional|min_overlap: 1 coverage_additional|start_nts: 0 coverage_additional|stop_nts: 0 |
name: value name: value name: value |
rep1.bam rep1_annot.gtf.gz value |