Repository revision
15:31c23d943c29

Repository 'sniplay'
hg clone https://toolshed.g2.bx.psu.edu/repos/dereeper/sniplay

SNP density tool metadata
Miscellaneous
SNP density
Calculate SNP densities along chromosome from a VCF input
sniplay_density
toolshed.g2.bx.psu.edu/repos/dereeper/sniplay/sniplay_density/2.0.0
2.0.0
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/dereeper/sniplay/sniplay_density/2.0.0 (this tool)
toolshed.g2.bx.psu.edu/repos/dereeper/sniplay/sniplay_density/1.4.0
toolshed.g2.bx.psu.edu/repos/dereeper/sniplay/sniplay_density/1.3.0
toolshed.g2.bx.psu.edu/repos/dereeper/sniplay/sniplay_density/1.2.0
sniplay_density
Requirements (dependencies defined in the <requirements> tag set)
name version type
perl not provided binary
perl-bioperl 1.6.924 package
vcftools 0.1.14 package
perl-vcftools-vcf 0.1.14 package
Functional tests
name inputs outputs required files
Test-1 step: 20000
filein: vcf2fastaAndHapmap-sample.vcf
attributes: name
attributes: name
vcf2fastaAndHapmap-sample.vcf
name