| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/trinity_ctat/ctat_analyze_differential_expression/ctat_analyze_differential_expression/1.0.0 (this tool) |
| ctat_analyze_differential_expression |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| python | 2.7 | package |
| subprocess32 | not provided | package |
| bzip2 | not provided | package |
| rsem | 1.3.0 | package |
| bioconductor-edger | 3 | package |
| bioconductor-qvalue | 2 | package |
| r-cluster | not provided | package |
| r-fastcluster | not provided | package |
| trinity | 2.6.6 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
EdgeRTarGz: Sp.edgeR.tar.gz Cvalue: 0.0 Pvalue: 0.05 |
attributes: name attributes: name attributes: name attributes: name |
Sp.edgeR.tar.gz name |