| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/instrain_compare/instrain_compare/1.5.3+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/instrain_compare/instrain_compare/1.5.3+galaxy0 (this tool) |
| instrain_compare |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| instrain | 1.5.3 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_is: ['N5_271_010G1_scaffold_min1000.fa-vs-N5_271_010G1.IS.zip', 'N5_271_010G1_scaffold_min1000.fa-vs-N5_271_010G2.IS.zip'] stb: N5_271_010G1.maxbin2.stb variant_calling|min_cov: 5 variant_calling|min_freq: 0.05 variant_calling|fdr: 1e-06 database|database_mode: False database|breadth: 0.5 other|store_coverage_overlap: False other|store_mismatch_locations: False other|include_self_comparisons: False other|skip_plot_generation: False other|group_length: 10000000 genome_clustering|ani_threshold: 0.99999 genome_clustering|coverage_treshold: 0.1 genome_clustering|clusterAlg: average |
name: value name: value name: value name: value name: value |
N5_271_010G1_scaffold_min1000.fa-vs-N5_271_010G1.IS.zip N5_271_010G1_scaffold_min1000.fa-vs-N5_271_010G2.IS.zip N5_271_010G1.maxbin2.stb value |