| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_cruxadapter/CruxAdapter/2.8+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_cruxadapter/CruxAdapter/2.6+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_cruxadapter/CruxAdapter/2.5+galaxy0 |
| CruxAdapter |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.6 | package |
| openms-thirdparty | 2.6 | package |
| blast | 2.9.0 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in: spectra_comet.mzML database: proteins.fasta extra_index_args: extra_search_args: extra_percolator_args: precursor_mass_tolerance: 10.0 precursor_mass_units: ppm fragment_bin_offset: 0.0 fragment_bin_width: 0.02 isotope_error: run_percolator: False enzyme: trypsin digestion: full-digest allowed_missed_cleavages: 0 decoy_format: peptide-reverse keep_terminal_aminos: NC cterm_modifications: nterm_modifications: modifications: test_fdr: 0.01 train_fdr: 0.01 adv_opts_cond|custom_enzyme: adv_opts_cond|decoy_prefix: decoy_ adv_opts_cond|deisotope: False adv_opts_cond|report_decoys: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
spectra_comet.mzML proteins.fasta value |