Repository revision
5:f5a5a2b39ff2

Repository 'last'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/last

LASTdb tool metadata
Miscellaneous
LASTdb
prepares sequences for subsequent comparison and alignment using lastal.
last_db
toolshed.g2.bx.psu.edu/repos/iuc/last/last_db/1205+galaxy0
1205+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/last/last_db/1205+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/last/last_db/1205+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/last/last_db/1021+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/last/last_db/1021+galaxy0
last_db
Requirements (dependencies defined in the <requirements> tag set)
name version type
last 1205 package
Functional tests
name inputs outputs required files
Test-1 input_files: humanMito.fa.gz
lastdb|repeats|uppercase: 0
lastdb|repeats|simple_repeat: 1
lastdb|repeats|sm_lower: True
name: value
humanMito.fa.gz
value
Test-2 input_files: hedgehog_prot_human.fa
lastdb|sequences_type|protein: -p
lastdb|lastdb_advanced|seeds|u: MURPHY10
name: value
hedgehog_prot_human.fa
value
Test-3 input_files: humanMito.fq.gz
lastdb|repeats|uppercase: 0
lastdb|repeats|simple_repeat: 1
lastdb|repeats|sm_lower: True
name: value
humanMito.fq.gz
value