Repository revision
7:5c9efee9cb1e

Repository 'gemini_stats'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/gemini_stats

GEMINI stats tool metadata
Miscellaneous
GEMINI stats
Compute useful variant statistics
gemini_stats
toolshed.g2.bx.psu.edu/repos/iuc/gemini_stats/gemini_stats/0.20.1
0.20.1
gemini --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/gemini_stats/gemini_stats/0.20.1 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/gemini_stats/gemini_stats/0.18.1.1
toolshed.g2.bx.psu.edu/repos/iuc/gemini_stats/gemini_stats/0.18.1.0
gemini_stats
Requirements (dependencies defined in the <requirements> tag set)
name version type
gemini 0.20.1 package
Functional tests
name inputs outputs required files
Test-1 stats|stats_option: --tstv-coding
infile: gemini_load_result1.db
stats|type: tstv-stats
attributes: name
gemini_load_result1.db
name
Test-2 stats|variants|keep: all
infile: gemini_de_novo_input.db
stats|type: gts-stats
attributes: name
gemini_de_novo_input.db
name