| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/5.2.2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/5.2.1+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/5.0.0+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/4.1.4 |
| toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/4.1.2 |
| toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/3.0.2+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/3.0.2+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/3.0.2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/3.0.2 |
| toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/2.0 |
| busco |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| busco | 5.2.1 | package |
| tar | 1.32 | package |
| fonts-conda-ecosystem | 1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: genome.fa busco_mode|use_augustus|use_augustus_selector: yes busco_mode|mode: geno lineage_dataset: arthropoda_odb10 adv|outputs: ['short_summary', 'missing'] |
name: value name: value name: value |
genome.fa value |
| Test-2 |
input: proteome.fa busco_mode|mode: prot lineage_dataset: arthropoda_odb10 adv|outputs: ['short_summary', 'missing', 'image'] |
name: value name: value name: value name: value |
proteome.fa value |
| Test-3 |
input: transcriptome.fa busco_mode|mode: tran lineage_dataset: arthropoda_odb10 adv|auto_lineage: --auto-lineage adv|outputs: ['short_summary', 'missing', 'image'] |
name: value name: value name: value name: value |
transcriptome.fa value |
| Test-4 |
input: genome.fa busco_mode|use_augustus|aug_prediction|augustus_species: human busco_mode|use_augustus|aug_prediction|augustus_mode: builtin busco_mode|use_augustus|use_augustus_selector: yes busco_mode|mode: geno lineage_dataset: arthropoda_odb10 adv|outputs: short_summary |
name: value name: value |
genome.fa value |
| Test-5 |
input: genome.fa busco_mode|use_augustus|aug_prediction|augustus_model: local.tar.gz busco_mode|use_augustus|aug_prediction|augustus_mode: history busco_mode|use_augustus|use_augustus_selector: yes busco_mode|mode: geno lineage_dataset: arthropoda_odb10 adv|outputs: ['short_summary', 'missing'] |
name: value name: value name: value |
genome.fa local.tar.gz value |
| Test-6 |
input: genome.fa busco_mode|use_augustus|use_augustus_selector: no busco_mode|mode: geno lineage_dataset: arthropoda_odb10 adv|outputs: ['short_summary', 'missing', 'image'] |
name: value name: value name: value name: value |
genome.fa value |