| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_featurelinkerunlabeled/FeatureLinkerUnlabeled/2.6+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_featurelinkerunlabeled/FeatureLinkerUnlabeled/2.5+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_featurelinkerunlabeled/FeatureLinkerUnlabeled/2.3.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_featurelinkerunlabeled/FeatureLinkerUnlabeled/2.2.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_featurelinkerunlabeled/FeatureLinkerUnlabeled/2.1.0 |
| FeatureLinkerUnlabeled |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.5 | package |
| openms-thirdparty | 2.5 | package |
| blast | 2.9.0 | package |
| openjdk | 8.0.192 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in: ['FeatureLinkerUnlabeled_1_input1.featureXML', 'FeatureLinkerUnlabeled_1_input2.featureXML', 'FeatureLinkerUnlabeled_1_input3.featureXML'] keep_subelements: False algorithm|second_nearest_gap: 2.0 algorithm|use_identifications: False algorithm|ignore_charge: True algorithm|ignore_adduct: True algorithm|distance_RT|max_difference: 200.0 algorithm|distance_RT|exponent: 1.0 algorithm|distance_RT|weight: 1.0 algorithm|distance_MZ|max_difference: 0.5 algorithm|distance_MZ|unit: Da algorithm|distance_MZ|exponent: 1.0 algorithm|distance_MZ|weight: 1.0 algorithm|distance_intensity|exponent: 1.0 algorithm|distance_intensity|weight: 0.0 algorithm|distance_intensity|log_transform: disabled adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FeatureLinkerUnlabeled_1_input1.featureXML FeatureLinkerUnlabeled_1_input2.featureXML FeatureLinkerUnlabeled_1_input3.featureXML value |
| Test-2 |
in: ['FeatureLinkerUnlabeled_2_input1.featureXML', 'FeatureLinkerUnlabeled_2_input2.featureXML', 'FeatureLinkerUnlabeled_2_input3.featureXML'] keep_subelements: False algorithm|second_nearest_gap: 2.0 algorithm|use_identifications: False algorithm|ignore_charge: False algorithm|ignore_adduct: True algorithm|distance_RT|max_difference: 100.0 algorithm|distance_RT|exponent: 1.0 algorithm|distance_RT|weight: 1.0 algorithm|distance_MZ|max_difference: 0.3 algorithm|distance_MZ|unit: Da algorithm|distance_MZ|exponent: 2.0 algorithm|distance_MZ|weight: 1.0 algorithm|distance_intensity|exponent: 1.0 algorithm|distance_intensity|weight: 0.5 algorithm|distance_intensity|log_transform: disabled adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FeatureLinkerUnlabeled_2_input1.featureXML FeatureLinkerUnlabeled_2_input2.featureXML FeatureLinkerUnlabeled_2_input3.featureXML value |
| Test-3 |
in: ['FeatureLinkerUnlabeled_3_input1.featureXML', 'FeatureLinkerUnlabeled_3_input2.featureXML'] keep_subelements: False algorithm|second_nearest_gap: 1.5 algorithm|use_identifications: False algorithm|ignore_charge: True algorithm|ignore_adduct: True algorithm|distance_RT|max_difference: 30.0 algorithm|distance_RT|exponent: 1.0 algorithm|distance_RT|weight: 1.0 algorithm|distance_MZ|max_difference: 0.3 algorithm|distance_MZ|unit: Da algorithm|distance_MZ|exponent: 2.0 algorithm|distance_MZ|weight: 1.0 algorithm|distance_intensity|exponent: 1.0 algorithm|distance_intensity|weight: 0.0 algorithm|distance_intensity|log_transform: disabled adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FeatureLinkerUnlabeled_3_input1.featureXML FeatureLinkerUnlabeled_3_input2.featureXML value |
| Test-4 |
in: ['FeatureLinkerUnlabeled_1_input1.featureXML', 'FeatureLinkerUnlabeled_1_input2.featureXML', 'FeatureLinkerUnlabeled_1_input3.featureXML'] keep_subelements: False algorithm|second_nearest_gap: 2.0 algorithm|use_identifications: True algorithm|ignore_charge: True algorithm|ignore_adduct: True algorithm|distance_RT|max_difference: 200.0 algorithm|distance_RT|exponent: 2.0 algorithm|distance_RT|weight: 1.0 algorithm|distance_MZ|max_difference: 0.5 algorithm|distance_MZ|unit: Da algorithm|distance_MZ|exponent: 2.0 algorithm|distance_MZ|weight: 1.0 algorithm|distance_intensity|exponent: 1.0 algorithm|distance_intensity|weight: 0.0 algorithm|distance_intensity|log_transform: disabled adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
FeatureLinkerUnlabeled_1_input1.featureXML FeatureLinkerUnlabeled_1_input2.featureXML FeatureLinkerUnlabeled_1_input3.featureXML value |