| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/prog/lcmsmatching/lcmsmatching/4.0.2 (this tool) |
| toolshed.g2.bx.psu.edu/repos/prog/lcmsmatching/lcmsmatching/3.3.1 |
| toolshed.g2.bx.psu.edu/repos/prog/lcmsmatching/lcmsmatching/3.2.0 |
| toolshed.g2.bx.psu.edu/repos/prog/lcmsmatching/lcmsmatching/3.1.8 |
| toolshed.g2.bx.psu.edu/repos/prog/lcmsmatching/lcmsmatching/3.1.7 |
| toolshed.g2.bx.psu.edu/repos/prog/lcmsmatching/lcmsmatching/3.0 |
| toolshed.g2.bx.psu.edu/repos/prog/lcmsmatching/lcmsmatching/2.1.3 |
| lcmsmatching |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| r-biodb | 1.2.2 | package |
| r-getopt | 1.20.2 | package |
| r-codetools | 0.2_15 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
inputfields: mz=mz db|dbtype: inhouse db|dburl: filedb.tsv mzrtinput: mz-input-small.tsv mzmode: pos |
attributes: name attributes: name attributes: name |
filedb.tsv mz-input-small.tsv name |
| Test-2 |
inputfields: mz=mz,rt=rt db|dbtype: inhouse toly: 0.8 tolx: 5 mzrtinput: mzrt-input-small.tsv chromcols: col12 db|dbrtunit: min db|dburl: filedb.tsv mzmode: pos |
attributes: name attributes: name attributes: name |
filedb.tsv mzrt-input-small.tsv name |
| Test-3 |
inputfields: mz=mz,rt=rt db|dbtype: inhouse toly: 0.8 tolx: 5 mzrtinput: mzrt-input-small.tsv chromcols: col12 tolz: 60 db|dbrtunit: min db|dburl: filedb.tsv mzmode: pos prec|neg: [(M-H)]-,[M-H]- prec|pos: [(M+H)]+,[M+H]+ prec|match: true |
attributes: name attributes: name attributes: name |
filedb.tsv mzrt-input-small.tsv name |