Repository revision
9:c55643c3d813

Repository 'interproscan'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/interproscan

InterProScan tool metadata
Miscellaneous
InterProScan
functional annotation
interproscan
toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/5.54-87.0+galaxy2
5.54-87.0+galaxy2
interproscan.sh --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/5.55-88.0+galaxy2
toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/5.54-87.0+galaxy2 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/5.54-87.0+galaxy1
toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/5.54-87.0+galaxy0
toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/5.52-86.0+galaxy1
toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/5.52-86.0+galaxy0
toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/1.2
interproscan
Requirements (dependencies defined in the <requirements> tag set)
name version type
interproscan 5.54-87.0 package
Functional tests
name inputs outputs required files
Test-1 input: prots.fa
seqtype: p
database: 5.54-87.0
applications: MobiDBLite
oformat: TSV
name: value
prots.fa
value
Test-2 input: prots.fa
seqtype: p
database: 5.54-87.0
applications: MobiDBLite
oformat: ['TSV', 'GFF3', 'XML', 'JSON']
name: value
name: value
name: value
name: value
prots.fa
value
Test-3 input: transcripts.fa
seqtype: n
database: 5.54-87.0
applications: MobiDBLite
oformat: ['TSV', 'GFF3', 'XML', 'JSON']
name: value
name: value
name: value
name: value
transcripts.fa
value
Test-4 input: prots.fa
seqtype: p
database: 5.54-87.0
applications: MobiDBLite
licensed|applications_licensed: ['Phobius', 'TMHMM']
licensed|use: true
oformat: TSV
prots.fa