| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/nanocompore_sampcomp/nanocompore_sampcomp/1.0.0rc3.post2+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/nanocompore_sampcomp/nanocompore_sampcomp/1.0.0rc3.post2+galaxy0 |
| nanocompore_sampcomp |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| nanocompore | 1.0.0rc3.post2 | package |
| tar | 1.32 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
file1_rep_0|file: sample1.tsv file1_rep_0|index: sample1.tsv.idx file2_rep_0|file: sample2.tsv file2_rep_0|index: sample2.tsv.idx fasta: reference.fa |
name: value name: value name: value |
sample1.tsv sample1.tsv.idx sample2.tsv sample2.tsv.idx reference.fa value |
| Test-2 |
label1: C1 file1_rep_0|file: sample1.tsv file1_rep_0|index: sample1.tsv.idx label2: C2 file2_rep_0|file: sample2.tsv file2_rep_0|index: sample2.tsv.idx fasta: reference.fa ap|max_invalid_kmers_freq: 0.2 ap|min_coverage: 31 ap|min_ref_length: 101 ap|comparison_methods: ['GMM', 'KS', 'TT', 'MW'] ap|sequence_context: 1 ap|sequence_context_weights: harmonic ap|pvalue_thr: 0.06 ap|logit: True ap|allow_warnings: True ap|out: ['results', 'shift', 'db', 'log'] |
name: value name: value name: value name: value |
sample1.tsv sample1.tsv.idx sample2.tsv sample2.tsv.idx reference.fa value |