Repository revision
4:04144473e59e

Repository 'dada2_removebimeradenovo'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/dada2_removebimeradenovo

dada2: removeBimeraDenovo tool metadata
Miscellaneous
Remove bimeras from collections of unique sequences
dada2_removeBimeraDenovo
toolshed.g2.bx.psu.edu/repos/iuc/dada2_removebimeradenovo/dada2_removeBimeraDenovo/1.18+galaxy0
1.18+galaxy0
echo $(R --version | grep version | grep -v GNU)", dada2 version" $(R --vanilla --slave -e "library(dada2); cat(sessionInfo()\$otherPkgs\$dada2\$Version)" 2> /dev/null | grep -v -i "WARNING: ")
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/dada2_removebimeradenovo/dada2_removeBimeraDenovo/1.20+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/dada2_removebimeradenovo/dada2_removeBimeraDenovo/1.18+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/dada2_removebimeradenovo/dada2_removeBimeraDenovo/1.16+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/dada2_removebimeradenovo/dada2_removeBimeraDenovo/1.14+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/dada2_removebimeradenovo/dada2_removeBimeraDenovo/1.12+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/dada2_removebimeradenovo/dada2_removeBimeraDenovo/1.12+galaxy0
dada2_removeBimeraDenovo
Requirements (dependencies defined in the <requirements> tag set)
name version type
bioconductor-dada2 1.18 package
Functional tests
name inputs outputs required files
Test-1 unqs: makeSequenceTable.tab
name: value
makeSequenceTable.tab
value
Test-2 unqs: dada_F3D0_S188_L001_R1.Rdata
name: value
dada_F3D0_S188_L001_R1.Rdata
value
Test-3 unqs: mergePairs_F3D0_S188_L001.Rdata
method: pooled
name: value
mergePairs_F3D0_S188_L001.Rdata
value