Repository revision
12:da0add7a8abd

Repository 'openms_noisefiltergaussian'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/openms_noisefiltergaussian

NoiseFilterGaussian tool metadata
Miscellaneous
Removes noise from profile spectra by using Gaussian filter (on uniform as well as non-uniform data).
NoiseFilterGaussian
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_noisefiltergaussian/NoiseFilterGaussian/2.6+galaxy0
2.6+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_noisefiltergaussian/NoiseFilterGaussian/2.8+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_noisefiltergaussian/NoiseFilterGaussian/2.6+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_noisefiltergaussian/NoiseFilterGaussian/2.5+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_noisefiltergaussian/NoiseFilterGaussian/2.3.0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_noisefiltergaussian/NoiseFilterGaussian/2.2.0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_noisefiltergaussian/NoiseFilterGaussian/2.1.0
NoiseFilterGaussian
Requirements (dependencies defined in the <requirements> tag set)
name version type
openms 2.6 package
openms-thirdparty 2.6 package
blast 2.9.0 package
ctdopts 1.4 package
Functional tests
name inputs outputs required files
Test-1 in: NoiseFilterGaussian_1_input.mzML
algorithm|gaussian_width: 1.0
algorithm|ppm_tolerance: 10.0
algorithm|use_ppm_tolerance: False
adv_opts_cond|processOption: inmemory
adv_opts_cond|force: False
adv_opts_cond|test: true
adv_opts_cond|adv_opts_selector: advanced
OPTIONAL_OUTPUTS: ctd_out_FLAG
name: value
name: value
NoiseFilterGaussian_1_input.mzML
value
Test-2 in: NoiseFilterGaussian_2_input.chrom.mzML
algorithm|gaussian_width: 50.0
algorithm|ppm_tolerance: 10.0
algorithm|use_ppm_tolerance: False
adv_opts_cond|processOption: inmemory
adv_opts_cond|force: False
adv_opts_cond|test: true
adv_opts_cond|adv_opts_selector: advanced
OPTIONAL_OUTPUTS: ctd_out_FLAG
name: value
name: value
NoiseFilterGaussian_2_input.chrom.mzML
value
Test-3 in: NoiseFilterGaussian_1_input.mzML
algorithm|gaussian_width: 1.0
algorithm|ppm_tolerance: 10.0
algorithm|use_ppm_tolerance: False
adv_opts_cond|processOption: lowmemory
adv_opts_cond|force: False
adv_opts_cond|test: true
adv_opts_cond|adv_opts_selector: advanced
OPTIONAL_OUTPUTS: ctd_out_FLAG
name: value
name: value
NoiseFilterGaussian_1_input.mzML
value
Test-4 in: NoiseFilterGaussian_2_input.chrom.mzML
algorithm|gaussian_width: 50.0
algorithm|ppm_tolerance: 10.0
algorithm|use_ppm_tolerance: False
adv_opts_cond|processOption: lowmemory
adv_opts_cond|force: False
adv_opts_cond|test: true
adv_opts_cond|adv_opts_selector: advanced
OPTIONAL_OUTPUTS: ctd_out_FLAG
name: value
name: value
NoiseFilterGaussian_2_input.chrom.mzML
value