Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/devteam/samtools_phase/samtools_phase/2.0.2 |
toolshed.g2.bx.psu.edu/repos/devteam/samtools_phase/samtools_phase/2.0.1 (this tool) |
toolshed.g2.bx.psu.edu/repos/devteam/samtools_phase/samtools_phase/2.0 |
toolshed.g2.bx.psu.edu/repos/devteam/samtools_phase/samtools_phase/1.0.0 |
samtools_phase |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
samtools | 1.9 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
input_bam: samtools_phase_in_1.bam option_set|option_sets: default |
attributes: name attributes: name attributes: name attributes: name |
samtools_phase_in_1.bam name |
Test-2 |
option_set|min_bq: 13 option_set|read_depth: 256 option_set|min_het: 37 option_set|ignore_chimeras: False option_set|drop_ambiguous: True option_set|block_length: 13 input_bam: samtools_phase_in_2.bam option_set|option_sets: advanced |
attributes: name attributes: name attributes: name attributes: name |
samtools_phase_in_2.bam name |
Test-3 |
option_set|min_bq: 13 option_set|read_depth: 256 option_set|min_het: 37 option_set|ignore_chimeras: True option_set|drop_ambiguous: False option_set|block_length: 13 input_bam: samtools_phase_in_2.bam option_set|option_sets: advanced |
attributes: name attributes: name attributes: name attributes: name |
samtools_phase_in_2.bam name |