Repository revision
9:6ec3ec95ae68

Repository 'mothur_make_design'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mothur_make_design

Make Design tool metadata
Miscellaneous
Make Design
Assign groups to Sets
mothur_make_design
toolshed.g2.bx.psu.edu/repos/iuc/mothur_make_design/mothur_make_design/1.39.5.0
1.39.5.0
mothur "#help()" | sed '7q;d' | cut -d" " -f2
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_make_design/mothur_make_design/1.39.5.0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_make_design/mothur_make_design/1.36.1.0
mothur_make_design
Requirements (dependencies defined in the <requirements> tag set)
name version type
mothur 1.39.5 package
Additional information about this tool
set -o pipefail; export TERM=vt100; 

#for $grouping in $groupings:
    #set grp_str = $grouping.groups.__str__
    #if grp_str:
        #for $grp in grp_str.split(','):
            echo -e "$grp\t$grouping.name" >> $design;
        #end for
    #end if
#end for
    
None
False
Functional tests
name inputs outputs required files
Test-1 source: amazon.mothur.shared
groupings_0|name: tardis
groupings_0|groups: ['forest', 'pasture']
groupings_1|name: dalek
groupings_1|groups: pasture
name: value
amazon.mothur.shared
value