Repository revision
5:586f9e1cdb2b

Repository 'samtools_rmdup'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup

RmDup tool metadata
Miscellaneous
RmDup
remove PCR duplicates
samtools_rmdup
toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/2.0.1
2.0.1
samtools 2>&1 | grep Version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/2.0.1 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/2.0
toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.1
toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
samtools_rmdup
Requirements (dependencies defined in the <requirements> tag set)
name version type
samtools 1.3.1 package
Functional tests
name inputs outputs required files
Test-1 bam_paired_end_type|bam_paired_end_type_selector: PE
bam_paired_end_type|force_se: False
input1: samtools-rmdup-input1.bam
attributes: name
samtools-rmdup-input1.bam
name