| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_spectra_plots/cardinal_spectra_plots/1.12.1.3 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_spectra_plots/cardinal_spectra_plots/1.12.1.2 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_spectra_plots/cardinal_spectra_plots/1.12.1.1 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_spectra_plots/cardinal_spectra_plots/1.12.1.0 |
| cardinal_spectra_plots |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| bioconductor-cardinal | 1.12.1 | package |
| r-base | 3.5.1 | package |
| r-ggplot2 | 3.0 | package |
| r-gridextra | 2.3 | package |
| r-scales | 1.0.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
pixel_conditional|repeatpixel_1|plusminusinDalton: 0.25 pixel_conditional|repeatpixel_0|zoomedplot_0|xlimmax: 320 pixel_conditional|repeatpixel_1|inputx: 2 pixel_conditional|repeatpixel_2|inputx: 1 pixel_conditional|repeatpixel_0|zoomedplot_1|xlimmax: 400 pixel_conditional|repeatpixel_0|zoomedplot_1|xlimmin: 350 infile: pixel_conditional|repeatpixel_0|zoomedplot_2|xlimmax: 420 pixel_conditional|repeatpixel_2|plusminusinDalton: 0.25 pixel_conditional|pixel_type: single_pixel pixel_conditional|repeatpixel_0|plusminusinDalton: 0.25 pixel_conditional|repeatpixel_2|inputy: 1 pixel_conditional|repeatpixel_0|inputy: 3 pixel_conditional|repeatpixel_0|inputx: 3 pixel_conditional|repeatpixel_0|zoomedplot_0|xlimmin: 310 pixel_conditional|repeatpixel_0|zoomedplot_2|xlimmin: 400 pixel_conditional|repeatpixel_1|inputy: 2 |
attributes: name |
name |
| Test-2 |
pixel_conditional|repeatpixel_1|plusminusinDalton: 0.25 pixel_conditional|repeatpixel_0|zoomedplot_0|xlimmax: 850 pixel_conditional|repeatpixel_1|inputx: 2 pixel_conditional|repeatpixel_1|inputy: 2 infile: pixel_conditional|pixel_type: single_pixel pixel_conditional|repeatpixel_0|plusminusinDalton: 0.25 pixel_conditional|repeatpixel_0|inputy: 2 pixel_conditional|repeatpixel_0|inputx: 5 pixel_conditional|repeatpixel_0|zoomedplot_0|xlimmin: 840 |
attributes: name |
name |
| Test-3 |
pixel_conditional|zoomed_sample_0|xlimmin: 1250 pixel_conditional|tabular_annotation|column_x: 1 pixel_conditional|tabular_annotation|load_annotation: yes_annotation pixel_conditional|tabular_annotation|tabular_header: True pixel_conditional|tabular_annotation|column_y: 2 pixel_conditional|tabular_annotation|column_names: 4 pixel_conditional|pixel_type: sample_pixel pixel_conditional|zoomed_sample_0|xlimmax: 1270 infile: pixel_conditional|tabular_annotation|annotation_file: annotations.tabular |
attributes: name |
annotations.tabular name |
| Test-4 |
pixel_conditional|zoomed_sample_0|xlimmin: 350 pixel_conditional|pixel_type: sample_pixel infile: 3_files_combined.RData pixel_conditional|zoomed_sample_0|xlimmax: 360 |
attributes: name |
3_files_combined.RData name |
| Test-5 |
pixel_conditional|repeatpixel_0|inputy: 1 pixel_conditional|repeatpixel_0|inputx: 1 pixel_conditional|pixel_type: single_pixel infile: empty_spectra.rdata pixel_conditional|repeatpixel_0|plusminusinDalton: 0.1 |
attributes: name |
empty_spectra.rdata name |