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Repository revision

Revision: 4:01219a31c48e

Repository 'hmmer_hmmscan'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/hmmer_hmmscan

hmmscan tool metadata

Miscellaneous

Name: hmmscan

Description: search protein sequence(s) against a protein profile database

Id: hmmer_hmmscan

Guid: toolshed.g2.bx.psu.edu/repos/iuc/hmmer_hmmscan/hmmer_hmmscan/3.2

Version: 3.2

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_hmmscan/hmmer_hmmscan/3.3

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_hmmscan/hmmer_hmmscan/3.2 (this tool)

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_hmmscan/hmmer_hmmscan/3.1b2

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_hmmscan/hmmer_hmmscan/0.1.1

toolshed.g2.bx.psu.edu/repos/iuc/hmmer_hmmscan/hmmer_hmmscan/0.1.0

hmmer_hmmscan

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

hmmer

3.2

package

Functional tests

name

inputs

outputs

required files

Test-1

notextw: True
input_hmm_conditional|input_hmm_source: history
seed: 4
seqfile: dna_target.fa
input_hmm_conditional|hmmfile: MADE1.hmm

attributes: name
attributes: name
attributes: name
attributes: name

MADE1.hmm
dna_target.fa
name