| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/rmarenco/hubarchivecreator/hubArchiveCreator/2.3.0 |
| toolshed.g2.bx.psu.edu/repos/rmarenco/hubarchivecreator/hubArchiveCreator/2.0.2 (this tool) |
| hubArchiveCreator |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| ucsc_tools | 312 | package |
| gff3ToGenePred | 0.0.1 | package |
| gtfToGenePred | 0.0.1 | package |
| genePredToBed | 0.0.1 | package |
| samtools | 1.2 | package |
| ucsc-gff3togenepred | 324 | package |
| ucsc-gtftogenepred | 324 | package |
| ucsc-genepredtobed | 324 | package |
| samtools | 1.3.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
format_0|formatChoice|GFF3: augustusDbia3.gff3 fasta_file: dbia3.fa format_0|formatChoice|format_select: gff3 |
output: None |
dbia3.fa augustusDbia3.gff3 |
| Test-2 |
fasta_file: dbia3.fa |
output: augustusOutput.html |
dbia3.fa augustusOutput.html |