| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/nturaga/minfi_pipeline/minfi_pipeline/1.0 (this tool) |
| minfi_pipeline |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| R | 3.2.1 | package |
| minfi | 1.16.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
control: list:paired collection case: list:paired collection |
qc_report: qc_report.pdf mds_plot: mds_plot.pdf dmps: dmps.csv dmrs: dmrs.csv |
5723646053/5723646053_R04C02_Grn.idat 5723646053/5723646053_R04C02_Red.idat 5723646053/5723646053_R05C02_Grn.idat 5723646053/5723646053_R05C02_Red.idat 5723646053/5723646053_R06C02_Grn.idat 5723646053/5723646053_R06C02_Red.idat 5723646052/5723646052_R02C02_Grn.idat 5723646052/5723646052_R02C02_Red.idat 5723646052/5723646052_R04C01_Grn.idat 5723646052/5723646052_R04C01_Red.idat 5723646052/5723646052_R05C02_Grn.idat 5723646052/5723646052_R05C02_Red.idat qc_report.pdf mds_plot.pdf dmps.csv dmrs.csv |