| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/florianbegusch/qiime2_wrappers/qiime_quality-control_evaluate-composition/2019.4 (this tool) |
| toolshed.g2.bx.psu.edu/repos/florianbegusch/qiime2_wrappers/qiime_quality-control_evaluate-composition/2018.4 |
| qiime_quality-control_evaluate-composition |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| qiime2 | 2019.4 | package |
| Additional information about this tool |
qiime quality-control evaluate-composition --i-expected-features=$iexpectedfeatures --i-observed-features=$iobservedfeatures #if $metadatafile: --m-metadata-file=$metadatafile #end if #if str($pdepth): --p-depth=$pdepth #end if #if str($ppalette) != 'None': --p-palette=$ppalette #end if #if $pplottar: --p-plot-tar #end if #if $pplottdr: --p-plot-tdr #end if #if $pplotrvalue: --p-plot-r-value #end if #if $pnoplotrsquared: --p-no-plot-r-squared #end if #if $pplotbraycurtis: --p-plot-bray-curtis #end if #if $pplotjaccard: --p-plot-jaccard #end if #if $pplotobservedfeatures: --p-plot-observed-features #end if #if $pnoplotobservedfeaturesratio: --p-no-plot-observed-features-ratio #end if #if str($mmetadatacolumn): --m-metadata-column="$mmetadatacolumn" #end if --o-visualization=ovisualization ; qiime tools export --input-path ovisualization.qzv --output-path out && mkdir -p '$ovisualization.files_path' && cp -r out/* '$ovisualization.files_path' && mv '$ovisualization.files_path/index.html' '$ovisualization'
| Functional tests |