| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/florianbegusch/qiime2_wrappers/qiime_vsearch_cluster-features-closed-reference/2019.4 (this tool) |
| toolshed.g2.bx.psu.edu/repos/florianbegusch/qiime2_wrappers/qiime_vsearch_cluster-features-closed-reference/2018.4 |
| qiime_vsearch_cluster-features-closed-reference |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| qiime2 | 2019.4 | package |
| Additional information about this tool |
qiime vsearch cluster-features-closed-reference
--i-sequences=$isequences
--i-table=$itable
--i-reference-sequences=$ireferencesequences
#if str($ppercidentity):
--p-perc-identity="$ppercidentity"
#end if
#if str($pstrand) != 'None':
--p-strand=$pstrand
#end if
#set $pthreads = '${GALAXY_SLOTS:-4}'
#if str($pthreads):
--p-threads="$pthreads"
#end if
--o-clustered-table=oclusteredtable
--o-clustered-sequences=oclusteredsequences
--o-unmatched-sequences=ounmatchedsequences
;
cp oclusteredtable.qza $oclusteredtable;
cp oclusteredsequences.qza $oclusteredsequences;
cp ounmatchedsequences.qza $ounmatchedsequences
| Functional tests |