| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_pathways/gemini_pathways/0.20.1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_pathways/gemini_pathways/0.18.1.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_pathways/gemini_pathways/0.18.1.0 |
| gemini_pathways |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| gemini | 0.20.1 | package |
| Additional information about this tool |
mkdir gemini &&
ln -s '${annotation_databases.fields.path}/gemini/data' gemini/data &&
export GEMINI_CONFIG='${annotation_databases.fields.path}' &&
gemini
pathways
-v $ensembl
$lof
'$infile'
> '$outfile'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
infile: gemini_load_result1.db ensembl: 71 |
name: value |
gemini_load_result1.db value |