| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/thondeboer/neat_genreads/genSeqErrorModel/1.0.0 (this tool) |
| genSeqErrorModel |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| numpy | not provided | package |
| matplotlib | not provided | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
lib_type_cond|lib_type: single stats|simulations: 100000 lib_type_cond|read1: chrMT_read1.fq |
chrMT_read1.fq |
|
| Test-2 |
lib_type_cond|lib_type: paired stats|simulations: 100000 lib_type_cond|read1: chrMT-PE_read1.fq lib_type_cond|read2: chrMT-PE_read2.fq |
chrMT-PE_read1.fq chrMT-PE_read2.fq |
|
| Test-3 |
lib_type_cond|read1: chrMT-PE_read1.fq lib_type_cond|read2: chrMT-PE_read2.fq stats|process_cond|process: max stats|simulations: 100000 stats|process_cond|max_reads: 100 lib_type_cond|lib_type: paired |
chrMT-PE_read1.fq chrMT-PE_read2.fq |