Repository revision
3:ec708a4031cc

Repository 'vcfbedintersect'
hg clone https://toolshed.g2.bx.psu.edu/repos/anton/vcfbedintersect

VCF-BEDintersect: tool metadata
Miscellaneous
Intersect VCF and BED datasets
vcfbedintersect
toolshed.g2.bx.psu.edu/repos/anton/vcfbedintersect/vcfbedintersect/0.0.2
0.0.2
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/anton/vcfbedintersect/vcfbedintersect/0.0.2 (this tool)
toolshed.g2.bx.psu.edu/repos/anton/vcfbedintersect/vcfbedintersect/0.0.1
vcfbedintersect
Requirements (dependencies defined in the <requirements> tag set)
name version type
vcflib 8a5602bf07 package
Functional tests
name inputs outputs required files
Test-1 invert: False
bed_vs_interval|bed_vs_interval_selector: bed
vcf_input: vcflib.vcf
bed_vs_interval|bed_input: vcfannotate.bed
out_file1: vcfbedintersect-test1.vcf
vcflib.vcf
vcfannotate.bed
vcfbedintersect-test1.vcf
Test-2 bed_vs_interval|bed_vs_interval_selector: interval
invert: False
bed_vs_interval|int_input: 20:1-30000
vcf_input: vcflib.vcf
out_file1: vcfbedintersect-test2.vcf
vcflib.vcf
vcfbedintersect-test2.vcf