Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccompartmentspolarization/hicexplorer_hiccompartmentspolarization/3.6+galaxy0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccompartmentspolarization/hicexplorer_hiccompartmentspolarization/3.4.3.0 (this tool) |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccompartmentspolarization/hicexplorer_hiccompartmentspolarization/3.4.2.0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccompartmentspolarization/hicexplorer_hiccompartmentspolarization/3.4.1.0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccompartmentspolarization/hicexplorer_hiccompartmentspolarization/3.3.1.0 |
hicexplorer_hiccompartmentspolarization |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
hicexplorer | 3.4.3 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
matrix_h5_cooler_multiple: hicTransform/obs_exp_norm.h5 pca: hicCompartmentsPolarization/pca1.bedgraph |
name: value |
hicTransform/obs_exp_norm.h5 hicCompartmentsPolarization/pca1.bedgraph value |
Test-2 |
matrix_h5_cooler_multiple: hicTransform/obs_exp_norm.h5 pca: hicCompartmentsPolarization/pca1.bedgraph quantile: 30 |
name: value |
hicTransform/obs_exp_norm.h5 hicCompartmentsPolarization/pca1.bedgraph value |
Test-3 |
matrix_h5_cooler_multiple: hicTransform/obs_exp_norm.h5 pca: hicCompartmentsPolarization/pca1.bedgraph outliers: 1.0 |
name: value |
hicTransform/obs_exp_norm.h5 hicCompartmentsPolarization/pca1.bedgraph value |