| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_luciphoradapter/LuciphorAdapter/2.8+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_luciphoradapter/LuciphorAdapter/2.6+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_luciphoradapter/LuciphorAdapter/2.6+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_luciphoradapter/LuciphorAdapter/2.5+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_luciphoradapter/LuciphorAdapter/2.3.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_luciphoradapter/LuciphorAdapter/2.2.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_luciphoradapter/LuciphorAdapter/2.1.0 |
| LuciphorAdapter |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.6 | package |
| openms-thirdparty | 2.6 | package |
| blast | 2.9.0 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in: LuciphorAdapter_1_input.mzML id: LuciphorAdapter_1_input.idXML fragment_method: CID fragment_mass_tolerance: 0.5 fragment_error_units: Da min_mz: 150.0 target_modifications: ['Phospho (S)', 'Phospho (T)', 'Phospho (Y)'] neutral_losses: "sty -H3PO4 -97.97690" decoy_mass: 79.966331 decoy_neutral_losses: "X -H3PO4 -97.97690" max_charge_state: 5 max_peptide_length: 40 max_num_perm: 16384 modeling_score_threshold: 0.95 scoring_threshold: 0.0 min_num_psms_model: 1 run_mode: 0 rt_tolerance: 0.01 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
LuciphorAdapter_1_input.mzML LuciphorAdapter_1_input.idXML value |