Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/mothur_cluster_classic/mothur_cluster_classic/1.39.5.0 (this tool) |
toolshed.g2.bx.psu.edu/repos/iuc/mothur_cluster_classic/mothur_cluster_classic/1.36.1.0 |
mothur_cluster_classic |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
mothur | 1.39.5 | package |
Additional information about this tool |
set -o pipefail; export TERM=vt100; ## create symlinks to input datasets ln -s '$dist' dist.dat && ln -s '$name' name.dat && ln -s '$count' count.dat && echo 'cluster.classic( phylip=dist.dat, #if $name: name=name.dat, #end if #if $count: count=count.dat, #end if method=$method, #if $cutoff: cutoff=$cutoff, #end if precision=$precision, sim=$sim )' | sed 's/ //g' ## mothur trips over whitespace | mothur | tee mothur.out.log
Functional tests |
name | inputs | outputs | required files |
Test-1 |
dist: env.dist savelog: True |
name: value name: value name: value name: value |
env.dist value |