Repository revision
1:93f25d52cfa5

Repository 'cdhit'
hg clone https://toolshed.g2.bx.psu.edu/repos/bebatut/cdhit

CD-HIT-EST tool metadata
Miscellaneous
CD-HIT-EST
Cluster a nucleotide dataset into representative sequences
cd_hit_est
toolshed.g2.bx.psu.edu/repos/bebatut/cdhit/cd_hit_est/1.3
1.3
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bebatut/cdhit/cd_hit_est/1.3 (this tool)
cd_hit_est
Requirements (dependencies defined in the <requirements> tag set)
name version type
cd-hit 4.6.4 package
Functional tests
name inputs outputs required files
Test-1 fasta_in: cd_hit_est_in.fa
advanced|settings: no
wordsize: 8
strand: False
similarity: 0.9
clusters_out: est_clusters_output.txt
fasta_out: est_fasta_output.fasta
cd_hit_est_in.fa
est_clusters_output.txt
est_fasta_output.fasta