Repository revision
1:93f25d52cfa5

Repository 'cdhit'
hg clone https://toolshed.g2.bx.psu.edu/repos/bebatut/cdhit

CD-HIT PROTEIN tool metadata
Miscellaneous
Cluster a protein dataset into representative sequences
cd_hit_protein
toolshed.g2.bx.psu.edu/repos/bebatut/cdhit/cd_hit_protein/1.3
1.3
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bebatut/cdhit/cd_hit_protein/1.3 (this tool)
cd_hit_protein
Requirements (dependencies defined in the <requirements> tag set)
name version type
cd-hit 4.6.4 package
Functional tests
name inputs outputs required files
Test-1 advanced|settings: no
similarity: 0.9
cluster_type: False
fasta_in: cd_hit_protein_in.fasta
print_alignment: False
wordsize: 5
clusters_out: protein_clusters_output.txt
fasta_out: protein_fasta_output.fasta
cd_hit_protein_in.fasta
protein_clusters_output.txt
protein_fasta_output.fasta