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Revision: 5:55b4b8bc250d

Repository 'hicexplorer_hiccomparematrices'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccomparematrices

hicCompareMatrices tool metadata

Miscellaneous

Name: hicCompareMatrices

Description: normalize and compare two Hi-C contact matrices

Id: hicexplorer_hiccomparematrices

Guid: toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccomparematrices/hicexplorer_hiccomparematrices/3.3.1.0

Version: 3.3.1.0

Version command string: hicCompareMatrices --version

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccomparematrices/hicexplorer_hiccomparematrices/3.4.1.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccomparematrices/hicexplorer_hiccomparematrices/3.3.1.0 (this tool)

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccomparematrices/hicexplorer_hiccomparematrices/2.1.4.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccomparematrices/hicexplorer_hiccomparematrices/2.1.2.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccomparematrices/hicexplorer_hiccomparematrices/2.1.0

hicexplorer_hiccomparematrices

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

hicexplorer

3.3.1

package

Functional tests

name

inputs

outputs

required files

Test-1

operation: log2ratio
matrix2: small_test_matrix.h5
matrix1: small_test_matrix.h5

attributes: name

small_test_matrix.h5
name