Repository revision
0:cc5a776acd47

Repository 'codon_freq_from_bicodons'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/codon_freq_from_bicodons

Get Codon frequency tool metadata
Miscellaneous
from bicodons
codon_freq_from_bicodons
toolshed.g2.bx.psu.edu/repos/iuc/codon_freq_from_bicodons/codon_freq_from_bicodons/0.1.2
0.1.2
codon_freq_from_bicodons.py --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/codon_freq_from_bicodons/codon_freq_from_bicodons/0.1.2 (this tool)
codon_freq_from_bicodons
Requirements (dependencies defined in the <requirements> tag set)
name version type
naltorfs 0.1.2 package
Additional information about this tool
codon_freq_from_bicodons.py

            --bicodons '$bicodons'

            --taxid '$taxid'

            --organelle '$organelle'

            --out '$out'

            --aa_out '$aa_out'

            #if $write_log:
                > '$log'
            #end if
    
None
False
Functional tests
name inputs outputs required files
Test-1 bicodons: bicodon_out.tabular
taxid: 9606
organelle: genomic
write_log: True
name: value
name: value
name: value
bicodon_out.tabular
value