Repository revision

Revision: 11:5c6f33e20fcc

Repository 'fml_gff3togtf'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/vipints/fml_gff3togtf

GBK-to-GFF tool metadata

Miscellaneous

Name: GBK-to-GFF

Description: converter

Id: fml_gbk2gff

Guid: toolshed.g2.bx.psu.edu/repos/vipints/fml_gff3togtf/fml_gbk2gff/2.1.0

Version: 2.1.0

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/vipints/fml_gff3togtf/fml_gbk2gff/2.1.0 (this tool)

toolshed.g2.bx.psu.edu/repos/vipints/fml_gff3togtf/fml_gbk2gff/2.0.0

fml_gbk2gff

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

biopython

1.65

package

Additional information about this tool

Command:

gbk_to_gff.py $inf_gbk > $gff_format

Interpreter: python

Forces a history refresh: False

Functional tests

name

inputs

outputs

required files

Test-1

inf_gbk: s_cerevisiae_SCU49845.gbk

gff_format: s_cerevisiae_SCU49845.gff

s_cerevisiae_SCU49845.gbk
s_cerevisiae_SCU49845.gff