Repository revision
10:2a9afed42353

Repository 'nanoplot'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/nanoplot

NanoPlot tool metadata
Miscellaneous
NanoPlot
Plotting suite for Oxford Nanopore sequencing data and alignments
nanoplot
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.44.1+galaxy0
1.44.1+galaxy0
NanoPlot --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.46.1+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.44.1+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.43.0+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.42.0+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.42.0+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.41.0+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.36.2+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.28.2+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.25.0+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.25.0+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/nanoplot/nanoplot/1.13.0
nanoplot
Requirements (dependencies defined in the <requirements> tag set)
name version type
nanoplot 1.44.1 package
Functional tests
name inputs outputs required files
Test-1 mode|reads|files: reads.fastq.gz
mode|reads|type: fastq_rich
mode|choice: batch
filter|downsample: 800
customization|plots: kde
name: value
name: value
name: value
reads.fastq.gz
value
Test-2 mode|reads|files: alignment.bam
mode|reads|type: bam
mode|choice: combined
filter|maxlength: 2000
customization|color: yellow
name: value
alignment.bam
value
Test-3 mode|reads|files: ['reads1.fasta', 'reads2.fasta']
mode|reads|type: fasta
mode|choice: combined
name: value
reads1.fasta
reads2.fasta
value