| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicconvertformat/hicexplorer_hicconvertformat/3.4.2.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicconvertformat/hicexplorer_hicconvertformat/3.4.1.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicconvertformat/hicexplorer_hicconvertformat/3.3.1.0 |
| hicexplorer_hicconvertformat |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| hicexplorer | 3.4.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
outputSingleMultiple_conditional|outputFormat_conditional|outputFormat_selector: h5 outputSingleMultiple_conditional|inputFormat_conditional|inputFormat_selector: optionCool outputSingleMultiple_conditional|outputSingleMultiple_selector: singleMatrix outputSingleMultiple_conditional|inputFormat_conditional|matrix_h5_cooler: small_test_matrix.cool |
attributes: name |
small_test_matrix.cool name |
| Test-2 |
outputSingleMultiple_conditional|outputFormat_conditional|outputFormat_selector: cool outputSingleMultiple_conditional|inputFormat_conditional|inputFormat_selector: optionH5 outputSingleMultiple_conditional|outputSingleMultiple_selector: singleMatrix outputSingleMultiple_conditional|inputFormat_conditional|matrix_h5_cooler: small_test_matrix.h5 |
attributes: name |
small_test_matrix.h5 name |
| Test-3 |
outputSingleMultiple_conditional|outputFormat_conditional|outputFormat_selector: homer outputSingleMultiple_conditional|inputFormat_conditional|inputFormat_selector: optionCool outputSingleMultiple_conditional|outputSingleMultiple_selector: singleMatrix outputSingleMultiple_conditional|inputFormat_conditional|matrix_h5_cooler: hicConvertFormat/small_test_matrix_chr4.cool |
attributes: name |
hicConvertFormat/small_test_matrix_chr4.cool name |
| Test-4 |
outputSingleMultiple_conditional|outputFormat_conditional|outputFormat_selector: ginteractions outputSingleMultiple_conditional|inputFormat_conditional|inputFormat_selector: optionCool outputSingleMultiple_conditional|outputSingleMultiple_selector: singleMatrix outputSingleMultiple_conditional|inputFormat_conditional|matrix_h5_cooler: hicConvertFormat/small_test_matrix_chr4.cool |
attributes: name |
hicConvertFormat/small_test_matrix_chr4.cool name |
| Test-5 |
outputSingleMultiple_conditional|resolutionOrManyToOne_conditional|resolutionOrManyToOne_selector: resolution_option outputSingleMultiple_conditional|resolutionOrManyToOne_conditional|inputFormat_conditional|matrix_h5_cooler: small_test_matrix.h5 outputSingleMultiple_conditional|resolutionOrManyToOne_conditional|inputFormat_conditional|inputFormat_selector: optionH5 outputSingleMultiple_conditional|resolutionOrManyToOne_conditional|resolutions: 5000 10000 20000 outputSingleMultiple_conditional|outputSingleMultiple_selector: multipleMatrix |
attributes: name |
small_test_matrix.h5 name |