| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/rnateam/sshmm/sshmm/1.0.7 (this tool) |
| sshmm |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| sshmm | 1.0.7 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_bed_file: PUM2_sites_hsa_chrM.bed advanced_prepro_params|elongation: 20 str_pred_method: rnastructures advanced_prepro_params|advanced_prepro_params_selector: ap_specify genome_fasta_file: hsa_chrM.fa output_options|output_prepro_files: True output_options|output_logo_files: True output_options|output_raw_files: True |
attributes: name attributes: name attributes: name attributes: name attributes: name attributes: name attributes: name attributes: name attributes: name attributes: name |
PUM2_sites_hsa_chrM.bed hsa_chrM.fa name |
| Test-2 |
input_bed_file: PUM2_sites_hsa_chrM.bed str_pred_method: rnashapes genome_fasta_file: hsa_chrM.fa output_options|output_prepro_files: True output_options|output_logo_files: True output_options|output_raw_files: True |
attributes: name attributes: name attributes: name attributes: name attributes: name attributes: name attributes: name attributes: name attributes: name attributes: name |
PUM2_sites_hsa_chrM.bed hsa_chrM.fa name |