Repository revision
3:73892ef177e3

Repository 'batchcorrection'
hg clone https://toolshed.g2.bx.psu.edu/repos/melpetera/batchcorrection

Determine_batch_correction tool metadata
Miscellaneous
to choose between linear, lowess and loess methods
Determine_BC
toolshed.g2.bx.psu.edu/repos/melpetera/batchcorrection/Determine_BC/2.1.2
2.1.2
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/melpetera/batchcorrection/Determine_BC/3.0.0
toolshed.g2.bx.psu.edu/repos/melpetera/batchcorrection/Determine_BC/2.1.2 (this tool)
toolshed.g2.bx.psu.edu/repos/melpetera/batchcorrection/Determine_BC/2.0.0
Determine_BC
Requirements (dependencies defined in the <requirements> tag set)
name version type
r-batch not provided package
r-ade4 not provided package
bioconductor-pcamethods not provided package
Functional tests
name inputs outputs required files
Test-1 dataMatrix: input-determinebc-dataMatrix.tsv
sampleMetadata: input-determinebc-sampleMetadata.tsv
advance|option: hide
ref_factor: batch
out_preNormSummary: output-determinebc-preNormSummary.txt
input-determinebc-dataMatrix.tsv
input-determinebc-sampleMetadata.tsv
output-determinebc-preNormSummary.txt