Repository revision
4:7a2a604ae9c8

Repository 'subtract'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/subtract

Subtract tool metadata
Miscellaneous
Subtract
the intervals of two datasets
gops_subtract_1
toolshed.g2.bx.psu.edu/repos/devteam/subtract/gops_subtract_1/1.0.0
1.0.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/subtract/gops_subtract_1/1.0.0 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/subtract/gops_subtract_1/0.0.1
gops_subtract_1
Requirements (dependencies defined in the <requirements> tag set)
name version type
bx-python 0.7.1 package
galaxy-ops 1.0.0 package
Functional tests
name inputs outputs required files
Test-1 input2: 2.bed
returntype:
input1: 1.bed
min: 1
output: gops-subtract.dat
2.bed
1.bed
gops-subtract.dat
Test-2 input2: 2_mod.bed
returntype:
input1: 1.bed
min: 1
output: gops_subtract_diffCols.dat
2_mod.bed
1.bed
gops_subtract_diffCols.dat
Test-3 input2: 2.bed
returntype:
input1: gops_subtract_bigint.bed
min: 1
output: gops-subtract.dat
2.bed
gops_subtract_bigint.bed
gops-subtract.dat
Test-4 input2: 2.bed
returntype: -p
input1: 1.bed
min: 10
output: gops-subtract-p.dat
2.bed
1.bed
gops-subtract-p.dat
Test-5 input2: gops_subtract_in2.gff
returntype:
input1: gops_subtract_in1.gff
min: 1
output: gops_subtract_out1.gff
gops_subtract_in2.gff
gops_subtract_in1.gff
gops_subtract_out1.gff
Test-6 input2: gops_subtract_in2.bed
returntype:
input1: gops_subtract_in1.gff
min: 1
output: gops_subtract_out1.gff
gops_subtract_in2.bed
gops_subtract_in1.gff
gops_subtract_out1.gff