| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/abricate/abricate/1.0.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/abricate/abricate/0.1.0 (this tool) |
| abricate |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| abricate | 0.3 | package |
| perl | 5.18.1 | package |
| blast+ | 2.2.31 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
fasta_input: Acetobacter.fna settings|advanced: simple |
report: output_noresults.txt |
Acetobacter.fna output_noresults.txt |
| Test-2 |
fasta_input: MRSA0252.fna settings|advanced: simple |
report: output_mrsa.txt |
MRSA0252.fna output_mrsa.txt |
| Test-3 |
settings|no_header: True fasta_input: MRSA0252.fna settings|advanced: advanced |
report: output_noheader.txt |
MRSA0252.fna output_noheader.txt |
| Test-4 |
settings|cull_limit: 100 fasta_input: MRSA0252.fna settings|advanced: advanced |
report: output_cull100.txt |
MRSA0252.fna output_cull100.txt |
| Test-5 |
settings|min_dna_id: 100 fasta_input: MRSA0252.fna settings|advanced: advanced |
report: output_minid100.txt |
MRSA0252.fna output_minid100.txt |