| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_burden/gemini_burden/0.20.1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_burden/gemini_burden/0.18.1.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_burden/gemini_burden/0.18.1.0 |
| gemini_burden |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| gemini | 0.20.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
infile: gemini_de_novo_input.db analysis|mode: counts |
attributes: name |
gemini_de_novo_input.db name |
| Test-2 |
nonsynonymous: --nonsynonymous infile: gemini_de_novo_input.db analysis|mode: counts |
attributes: name |
gemini_de_novo_input.db name |
| Test-3 |
analysis|casecontrol|source: ped infile: gemini_de_novo_input.db analysis|mode: c-alpha |
attributes: name |
gemini_de_novo_input.db name |
| Test-4 |
analysis|casecontrol|cases: 1_dad 1_mom 3_dad 3_mom analysis|casecontrol|controls: 1_kid 3_kid analysis|casecontrol|source: custom infile: gemini_de_novo_input.db analysis|mode: c-alpha |
attributes: name |
gemini_de_novo_input.db name |
| Test-5 |
analysis|permutations: 2 analysis|casecontrol|controls: 1_kid 3_kid analysis|casecontrol|cases: 1_dad 1_mom 3_dad 3_mom analysis|casecontrol|source: custom analysis|mode: c-alpha analysis|save_tscores: True infile: gemini_de_novo_input.db |
attributes: name |
gemini_de_novo_input.db name |