Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/medaka_consensus_pipeline/medaka_consensus_pipeline/1.4.4+galaxy0 |
toolshed.g2.bx.psu.edu/repos/iuc/medaka_consensus_pipeline/medaka_consensus_pipeline/1.3.2+galaxy0 (this tool) |
toolshed.g2.bx.psu.edu/repos/iuc/medaka_consensus_pipeline/medaka_consensus_pipeline/1.0.3+galaxy2 |
toolshed.g2.bx.psu.edu/repos/iuc/medaka_consensus_pipeline/medaka_consensus_pipeline/1.0.3+galaxy1 |
toolshed.g2.bx.psu.edu/repos/iuc/medaka_consensus_pipeline/medaka_consensus_pipeline/1.0.1+galaxy1 |
toolshed.g2.bx.psu.edu/repos/iuc/medaka_consensus_pipeline/medaka_consensus_pipeline/1.0.1+galaxy0 |
medaka_consensus_pipeline |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
medaka | 1.3.2 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
i: basecalls.fastq d: assembly.fasta |
name: value name: value name: value |
basecalls.fastq assembly.fasta value |
Test-2 |
i: basecalls.fastq d: assembly.fasta m: r941_min_fast_g303 b: 99 out: ['consensus', 'probs', 'calls', 'log', 'gaps'] |
name: value name: value name: value name: value name: value |
basecalls.fastq assembly.fasta value |