| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.9.3+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.8.1+galaxy93 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.8.1+galaxy9 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.8.1+3+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.8.1+2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.8.1+1+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.8.1+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.8.1+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.7.2+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.7.2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.6.0+galaxy4 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.6.0+galaxy3 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.6.0+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.6.0+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.6.0+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.4.3+galaxy11 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.4.3+galaxy10 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.4.3+galaxy9 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.4.3+galaxy8 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.4.3+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.4.2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.3.2+galaxy1 |
| scanpy_compute_graph |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| scanpy-scripts | 1.9.301 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_obj_file: run_pca.h5 input_format: anndata output_format: anndata settings|n_neighbors_file: n_neighbors.txt settings|n_pcs: 50 settings|knn: True settings|method: umap settings|random_seed: 0 settings|default: False |
name: value |
run_pca.h5 n_neighbors.txt value |
| Test-2 |
input_obj_file: run_pca.h5 input_format: anndata output_format: anndata settings|n_neighbors: 15 settings|n_pcs: 50 settings|knn: True settings|method: umap settings|random_seed: 0 settings|default: False |
name: value |
run_pca.h5 value |