| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.4.3+galaxy8 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.4.3+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.4.2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_compute_graph/scanpy_compute_graph/1.3.2+galaxy1 |
| scanpy_compute_graph |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| scanpy-scripts | 0.2.8 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
settings|random_seed: 0 input_format: anndata settings|method: umap output_format: anndata settings|n_pcs: 50 settings|knn: True settings|n_neighbours: 15 input_obj_file: run_pca.h5 settings|default: False |
attributes: name |
run_pca.h5 name |