Repository revision
12:47c747351d62

Repository 'scanpy_normalise_data'
hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data

Scanpy NormaliseData tool metadata
Miscellaneous
to make all cells having the same total expression
scanpy_normalise_data
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data/scanpy_normalise_data/1.4.3+galaxy10
1.4.3+galaxy10
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data/scanpy_normalise_data/1.6.0+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data/scanpy_normalise_data/1.4.3+galaxy10 (this tool)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data/scanpy_normalise_data/1.4.3+galaxy9
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data/scanpy_normalise_data/1.4.3+galaxy8
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data/scanpy_normalise_data/1.4.3+galaxy6
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data/scanpy_normalise_data/1.4.3+galaxy3
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data/scanpy_normalise_data/1.4.3+galaxy2
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data/scanpy_normalise_data/1.4.3+galaxy1
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data/scanpy_normalise_data/1.4.2+galaxy1
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_normalise_data/scanpy_normalise_data/1.3.2+galaxy1
scanpy_normalise_data
Requirements (dependencies defined in the <requirements> tag set)
name version type
scanpy-scripts 0.2.10 package
Functional tests
name inputs outputs required files
Test-1 save_raw: False
input_obj_file: filter_genes.h5
output_format: anndata
scale_factor: 1e4
input_format: anndata
attributes: name
filter_genes.h5
name