Revision: 3:a18f8d34524a

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_export_cellbrowser

Miscellaneous

Name: Seurat Export2CellBrowser

Description: produces files for UCSC CellBrowser import.

Id: seurat_export_cellbrowser

Guid: toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_export_cellbrowser/seurat_export_cellbrowser/3.1.1+galaxy0

Version: 3.1.1+galaxy0

Version command string: echo $(R --version | grep version | grep -v GNU)", seurat version" $(R --vanilla --slave -e "library(seurat); cat(sessionInfo()\$otherPkgs\$seurat\$Version)" 2> /dev/null | grep -v -i "WARNING: ")

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_export_cellbrowser/seurat_export_cellbrowser/3.1.2+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_export_cellbrowser/seurat_export_cellbrowser/3.1.1+galaxy0 (this tool)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_export_cellbrowser/seurat_export_cellbrowser/3.1.1_0.0.6+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_export_cellbrowser/seurat_export_cellbrowser/2.3.1+galaxy0

seurat_export_cellbrowser

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name	version	type
seurat-scripts	0.0.7	package

Functional tests

name	inputs	outputs	required files
Test-1	markers_file: out_markers.csv	attributes: name	out_markers.csv name