| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_roh/gemini_roh/0.20.1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_roh/gemini_roh/0.18.1.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_roh/gemini_roh/0.18.1.0 |
| gemini_roh |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| gemini | 0.20.1 | package |
| Additional information about this tool |
gemini roh
--min-snps $min_snps
--min-total-depth $min_total_depth
--min-gt-depth $min_gt_depth
--min-size $min_size
--max-hets $max_hets
--max-unknowns $max_unknowns
#if $samples.strip():
#set $samples = ','.join([f.strip() for f in $samples.split(',')])
-s '$samples'
#end if
'$infile'
> '$outfile'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
infile: gemini_load_result1.db min_snps: 3 min_total_depth: 0 min_size: 10 |
name: value |
gemini_load_result1.db value |